Data Types in Project Data

Last Updated: May 01, 2018 08:23AM PDT

Summary: This article provides a high-level overview of the data record data types available in the Project Data collection. These data types are intended to help users understand what is present at any particular point in a pipeline and what components could be added next.

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Data Types Overview

The following diagram shows the basic data types passed between Project Data components and their relationships. Each of these underlying data types is represented as a Pipeline Pilot data record type.

The numbers above the arrowheads shows the cardinality of the relationship between the types. For example, on the double-headed arrow between Batch and Compound, the arrowhead at the Compound end has cardinality "1", meaning a Batch has a relationship to exactly one Compound. The arrowhead on the Batch end has cardinality "1-N", meaning a Compound has at least one, but possibly any number of Batches related to it.



There is a one subfolder in the Project Data/Data Types folder for each data type (with the exception of Sample Attachment, which is a subfolder within Sample subfolder).

Project Data Type

A Project data record references a named repository of data in Project Data. The information in a project may be shared among several users. A Project can contain one or more Batch Group records.

Project Property Description
Project SCD The project ScienceCloud ID.
Project The project name, e.g. "SC_DEMO_PROJECT".
Project Description A longer description of the purpose of a project.
Assay Results Creation Whether you have permission to create Assay Results in this project.
Assay Results Delete Whether you have permission to delete Assay Results in this project.
Assay Results Read Whether you have permission to read Assay Results in this project.
Assay Results Update Whether you have permission to update Assay Results in this project.
Batches Creation Whether you have permission to create Batches in this project.
Batches Delete Whether you have permission to delete Batches in this project.
Batches Read Whether you have permission to read Batches in this project.
Batches Update Whether you have permission to update Batches in this project.
Batches View Structure Whether you have permission to view the structures in Batches in this project.
Documents Creation Whether you have permission to create Documents in this project.
Documents Delete Whether you have permission to delete Documents in this project.
Documents Read Whether you have permission to read Documents in this project.
Documents Update Whether you have permission to update Documents in this project.
Notifications Creation Whether you have permission to create Notifications in this project.
Notifications Delete Whether you have permission to delete Notifications in this project.
Notifications Read Whether you have permission to read Notifications in this project.
Notifications Update Whether you have permission to update Notifications in this project.
Attachments Read Whether you have permission to read attachments in this project.
Team The name of the associated team.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Project.
Connection Name The name of the connection opened by the ScienceCloud Connection component.

To obtain Project data records, use the Project Query component.

To visualize the properties in a Project data record, use the Project to Generic Data component and drop the results into a viewer.

You can include Project information in a report using the Project View component and pass the results into a Report Viewer.

Batch Group Data Type

A Batch Group data record represents an organizational subunit of a Project. A Batch Group is contained in a single Project. A Batch Group may contain any number of Batches.

Batch Group Property Description
Batch Group SCID The ScienceCloud ID of the batch group.
Batch Group ID The human-readable ID of the batch group, e.g. "COMPOUNDS". This must be unique across all your projects within a ScienceCloud team.
Batch Group Description A description of this batch group.
Project The project name, e.g. "SC_DEMO_PROJECT".
Number of Batches The number of batche sin this batch group.
Number of Entities The number of different entities in this batch group, which may be smaller than hte number of batches, as an entity may have multiple batches.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Batch-Group.
Connection Name The name of the connection opened by the ScienceCloud Connection component.

To obtain Batch Group data records, use the Batch Group Query component.

To visualize the properties in a Batch Group data record, use the Batch Group to Generic Data component and drop the results into a viewer.

You can include Batch Group information in a report using the Batch Group View component and pass the results into a Report Viewer.

Batch Data Type

A Batch data record represents a named batch in Project Data. Each batch has a unique ID, called a Batch ID. A Batch is associated with exactly one Entity. A Batch may contain any number of Samples. A Batch may contain any number of Assay Results. A Batch is a member of a single Batch Group. A Batch is a member of a single Project. A Batch may be contained in any number of Hit Lists. If there is molecular data, the Batch is also a Molecule.

Batch Property Description
Project The project name, e.g. "SC_DEMO_PROJECT".
Batch Group ID The name of the batch group within the project, e.g. "COMPOUNDS".
Batch SCID The batch's ScienceCloud ID.
Batch ID The batch ID or IDs of the batch. These are unique in a ScienceCloud team. The IDs are treated case-insensitive.
Batch Tag Any tags marking this batch. The tags are treated case-insensitive.
Entity SCID The ScienceCloud ID of the entity associated with the batch.
Entity ID The identifier of the structure shared by different batches.
  • When adding new records, if the field is defined, ScienceCloud will use it instead of automatically generating a Entity ID.
  • When updating existing records, it is only used for update of entity-level information, if Batch ID is undefined, it must be unique in the system.
Entity Tag Any number of tags that may be associated with this batch's entity.
Scientist Name The username of the chemist to assign the entity to. This is the same username used to login into ScienceCloud. If undefined, default value is set to the username used during registration.
Scientist Organization The organization of the chemist.
Batch Comment Free text for additional information and comments on the batch. Batch Comment will be shortened to 150 characters.
Experiment Number The ScienceCloud Experiments experiment to which the batch is related.
Sample Application Batch Name The batch name used in ScienceCloud Sample to refer to the batch.
Salt Name Name of the salt. You can use the Salt Query component to see a list of valid salt names.
Salt Coefficient Number of occurrences of the salt.
Registration Date A user-provided registration date.
Insert Date A system-generated date of when the batch was inserted.
User Name The name of the user who registered the batch.
Change Type If the batch has been changed, the type of change.
Batch Change Date If the batch has been changed, the date of the change.
Similarity Score If the batch was from a similarity query, the score.
SMILES If provided, the SMILES of the molecule.
Change Time If the batch has been changed, when the change occurred.
Notification SCID The Notification ScienceCloud identifier, if a notification was generated for this batch.
JSON A property used to pass along custom properties.
Original Batch ID A property used to specify Batch IDs to be removed (updated) by a subsequent Update Batches component.
Original Batch Tag A property used to specify Batch Tags to be removed (updated) by a subsequent Update Batches component.
JSON A property used to pass along custom properties.
Custom Properties A property used to store the list of property names of your custom properties.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Batch.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To obtain Batch data records, use the Batch Query component.

To visualize the properties in a Batch data record, use the Batch to Generic Data component and drop the results into a viewer.

You can include Batch information in a report using the Batch View component and pass the results into a Report Viewer.

Entity Data Type

An Entity data record represents molecular information. A given entity may be shared by multiple Batches. An Entity is a Molecule, and so can be used anywhere a molecule is legal.

Entity Property Description
Project The project name, e.g. "SC_DEMO_PROJECT".
Batch Group ID The name of the batch group within the project, e.g. "COMPOUNDS".
Entity SCID The ScienceCloud ID of the entity.
Entity ID The identifier of the structure shared by different batches.
  • When adding new records, if the field is defined, ScienceCloud will use it instead of automatically generating an Entity ID.
  • When updating existing records, it is only used to update entity-level information, if Batch ID is undefined.
  • It must be unique in the system.
Entity Tag Any number of tags that may be associated with this entity.
Entity Name Chemical name of the entity.
Entity Status The status of the entity.
Entity Comment Comments on the entity.
Entity Text Representation The HELM string or sequence corresponding to the entity.
Entity Status Comment Comments on the status.
Trivial Name Trivial name of the entity.
Exact Mass Exact mass of the entity.
Stereo Designation Free text to comment on the stereochemistry of the entity. Value will be automatically shortened to 100 Characters.
Entity Type Optional classification code for the entity.
Molecular Weight Molecular weight of the entity. If not provided, it is automatically calculated from the structure.
Molecular Formula Molecular Formula of the entity. If not provided, it is automatically calculated from the structure.
Entity Change Date If the entity has been changed, the date of the change.
Similarity Score If the batch was from a similarity query, the score.
SMILES If provided, the SMILES of the molecule.
CTAB If provided, the CTAB of the molecule.
Original Entity ID A property used to specify Entity IDs to be removed (updated) by a subsequen Update Entity component.
Original Entity Tag A property used to specify Entity Tags to be removed (updated) by a subsequent Update Entity component.
Custom Properties A property used to store the list of property names of your custom properties.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Entity.
Connection Name The name of the connection opened by ScienceCloud Connection component.

There are also a number of calculated physical-chemical properties that may be available:

Physchem Property Description
ALogP The aLogP estimate of LogP.
H-Bond Acceptor Atoms The number of H-bond acceptor atoms.
Aromatic Rings Size 5 or 6 The number of aromatic rings of size 5 or 6.
H-Bond Donor Atoms The number of H-bond donor atoms.
LogD Estimate of LogD.
O or N Atoms Number of Oxygen and Nitrogen atoms.
OH or NH Atoms Number of -OH or -NH groups.
pKa pKa information.
Polar Surface Area Amount of polar surface area.
Rings Number of rings.
Rotatable Bonds Number of rotatable bonds.
Rule of 5 Violations Number of rule of 5 violations.
Solubility Estimate of solubility.

To obtain Entity data records, use the Entity Query component.

To visualize the properties in an Entity data record, use the Entity to Generic Data component and drop the results into a viewer.

You can include Entity information in a report using the Entity View component and pass the results into a Report Viewer.

Entity Status Data Type

An Entity Status data record records the status of an Entity. An Entity Status may be used by one or more Entities.

Entity Status Property Description
Entity Status SCID The ScienceCloud ID of the Entity Status.
Entity Status ID The name of the status, e.g. "Active" or "Terminated".
Team The name of the associated team.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Entity-Status.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To obtain Entity Status data records, use the Entity Status Query component.

Entity Type Data Type

An Entity Type data record defines the type of structural entity being stored. An Entity Type may be used by one or more Entities.

Entity Type Property Description
Entity Type SCID The ScienceCloud ID of the Entity Type.
Entity Name The name of the Entity Type, e.g. "Custom antibody".
Entity Type The three-letter code of the Entity Type, e.g. "SMM" (small molecule).
Entity Type Display Format The display format of the Entity Type, e.g. "HELM".
Entity Type Is Default Whether this is the default entity type.
Sample Application Batch Type The ScienceCloud Sample batch type  to which the Entity Type relates.
Team The name of the associated team.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Entity-Type.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To obtain Entity Type data records, use the Entity Type Query component.

Sample Data Type

A Sample data record represents a physical sample of the batch, with a particular location (container and position). A Sample is associated with a single Batch. A Sample may have multiple Shippings. A Sample may have one or more Sample Attachment files (i.e., analytical traces) attached to it.

Sample Property Description
Project The project name, e.g. "SC_DEMO_PROJECT".
Batch Group SCID The batch group ScienceCloud ID.
Batch Group ID The name of the batch group within the project, e.g. "COMPOUNDS".
Sample SCID The ScienceCloud ID for the attaching sample.
Entity SCID The ScienceCloud ID for the entity.
Batch SCID The ScienceCloud ID for this batch.
Batch ID The batch ID or IDs of the batch. These are unique in a ScienceCloud team. The IDs are treated case-insensitive.
Entity ID The IDs associated with this sample's entities
Sample Container ID Identifier of the container storing the sample (e.g. vial number, plate number). Each sample of a batch is uniquely identified by its Sample Container ID and (if defined) its Sample Well.
Sample Well Well position in a plate of format defined by Plate Format.
Sample Plate Format Sample Container Format. Supported values are 96 or 384. If left undefined, a default value of 96 is used.
Sample Location Physical location of sample container. Sample Container ID is required if Sample Location is defined.
Retention Purity retention time (in minutes).
Concentration Concentration of the sample.
Concentration Unit Unit of the above Concentration.
Purity Purity of the sample in % as determined by a standard analytical technique (HPLC/UV or HPLC/MS for example).
Purity Comment Any other comments about the analysis of the purity of the sample.
Purity Trace Type The trace type used to determine the purity. You can use the Trace Type Query component to see a list of valid trace types.
Quantity Quantity of the sample.
Quantity Unit Unit of the above quantity. If undefined, mg will be used.
MS Result The mass observed by the analytical instrument (Mass Spec.).
MS Comment Free text comment that can be used to list adduct(s), protonation, and other MS related comments.
MS Ion Found Was the mass of the molecule found by the analytical instrument? (Y/N)
Initial Quantity The initial quantity of the material contained in a vial or well.
Sample Date The date a sample was reported to the system.
Sample Change Date If the sample has been changed, the date of the change.
Attachment File Path If the data contains attachment information for later registration, this points to the analytical file.
Attachment Trace Type If the data contains attachment information for later registration, the analytical trace type. You can use the Trace Type Query component to see a list of valid trace types.
Original Sample Container ID If the data contains this property, then it is used to identify a sample, and the value CONTAINER_ID is used to update that value.
Original Sample Well If the data contains this property, then it is used to identify a sample, and the value WELL is used to update that value.
Custom Properties A property used to store the list of property names of your custom properties.
REST API ID The object identifier used in the REST APIs.
Type The object type name:Sample.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To get Sample data records, use the Sample Query component.

To visualize the properties in a Sample data record, use the Sample to Generic Data component and drop the results into a viewer.

You can include Sample information in a report using the Sample View component and pass the results into a Report Viewer.

Sample Attachment Data Type

Sample Attachment data record represents an analytical trace file attached to a Sample. It is a file of any format with an associated type describing the nature of the analysis (NMR, MS, etc.).

Sample Attachment Property Description
Sample Attachment SCID The ScienceCloud ID for this attachment.
Sample SCID The ScienceCloud ID for the attaching sample.
Entity SCID The ScienceCloud ID for the entity.
Batch SCID The ScienceCloud ID for this batch.
Sample Container ID Identifier of the container storing the sample (e.g., vial number, plate number). Each sample of a batch is uniquely identified by its Sample Container ID and (if defined) its Sample Well.
Sample Well Well position in a plate of format defined by Plate Format.
Attachment Trace Type Type of trace used to detect the purity. You can use the Trace Type Query component to see a list of valid trace types.
Attachment Name The file path for an analytical trace file of a sample.
Attachment Content Type The mime type of the attachment file.
Attachment Content The content of the attachment file, which may be binary or text.
Attachment URL The URL of the attachment, if that is what was provided.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Attachment.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To get Sample Attachment data records, use the Sample to Sample Attachment component on a sample that contains attachments.

Shipping Data Type

A Shipping data record represents the transfer of a portion of a Sample to a destination. A Shipping is a member of a single Sample.

Shipping Property Description
Project The project name, e.g. "SC_DEMO_PROJECT".
Batch Group ID The name of the batch group within the project, e.g. "COMPOUNDS".
Shipping SCID The Shipping ScienceCloud ID.
Batch SCID The batch ScienceCloud ID.
Entity ID The IDs associated with this sample's entities.
Sample Container ID Identifier of the container storing the sample (e.g. vial number, plate number). Each sample of a batch is uniquely identified by its Sample Container ID and (if defined) its Sample Well.
Sample Well Well position in a plate of format defined by Plate Format.
Shipping Container ID Identifier of the container of the shipping (e.g. vial number, plate number). Each shipping of a sample of a batch is uniquely identified by its Shipping Container ID and (if defined) its Shipping Container Position.
Shipping Well Well position in a plate of format defined by Shipping Plate Format. When adding new records, if left undefined, Shipping Container ID is assigned to a default value -1.
Shipping Quantity Quantity shipped.
Shipping Quantity Unit Unit of Shipping Quantity.
Shipping Tracking Number Tracking number of the carrier (e.g. FedEx tracking number).
Shipping Date A user-provided shipping date
Shipping Insert Date A system-generated date when this shipping record was inserted.
Shipping Change Date If the shipping has been changed, the date of the change.
Batch ID The batch ID or IDs of the batch. These are unique in a ScienceCloud team. The IDs are treated case-insensitive.
Entity SCID The ScienceCloud ID of the entity.
Sample SCID The ScienceCloud ID for the attaching sample.
Shipping Plate Format Shipping Container Format. Supported values are 96 or 384. If left undefined, a default value of 96 is used.
Shipping To The person destination of the shipping. This must be a valid ScienceCloud username.
Shipping Tag A user provided tag for this shipping, such as a customer bar code.
Original Shipping Container ID If the data contains this property, then it is used to identify a sample, and the value SHIP_CONTAINER_ID is used to update that value.
Original Shipping Well If the data contains this property, then it is used to identify a sample, and the value SHIP_WELL is used to update that value.
Custom Properties A property used to store the list of property names of your custom properties.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Shipping.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To obtain Shipping data records, use the Shipping Query component.

To visualize the properties in a Shipping data record, use the Shipping to Generic Data component and drop the results into a viewer.

You can include Shipping information in a report using the Shipping View component and pass the results into a Report Viewer.

Trace Type Data Type

Trace Type data record refers to a declared analytical trace type for sample attachments. A Trace Type may be used by a Sample Attachment.

Trace Type Property Description
Trace Type SCID The ScienceCloud ID of the Trace Type.
Trace Type ID The ID of the trace type, e.g. "COA".
Trace Type Name The name of the trace type, e.g. "Certificate of Analysis".
Trace Type Description The description of the trace type.
Team The name of the associated team.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Trace-Type.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To obtain Trace Type data records, use the Trace Type Query component.

Assay Data Type

An Assay data record denotes an assay definition in Project Data. All Assay Results are associated with an Assay. An Assay will be used in one or more Projects. An Assay will contain one or more Assay Parameters. An Assay will contain one or more Assay Result Types. An Assay will be a member of one or more Assay Groups.

Assay Property Description
Assay SCID The ScienceCloud ID of the Assay.
Assay Name A unique, long name for this assay.
Assay Short Name A unique short name for this assay.
Assay Type The type of the assay, e.g. "In Vitro".
SOP File Name The name of the SOP file for this assay.
User Defined Properties A group of user-defined properties.
Team The name of the associated team.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Assay.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To obtain Assay data records, use the Assay Query component.

Assay Result Data Type

An Assay Result data record represents a biological result, PK result, or ADME result. An Assay Result is associated with some particular Batch.

Assay Result Property Description
Project The project name, e.g. "SC_DEMO_PROJECT".
Batch Group ID The name of the batch group within the project, e.g. "COMPOUNDS".
Assay Result SCID The assay result ScienceCloud ID.
Batch SCID The batch ScienceCloud ID.
Batch ID The batch ID of the batch associated with this assay result.
Entity SCID The ScienceCloud ID of the entity.
Entity ID
The identifier of the structure shared by different batches.
  • When adding new records, if the field is defined, ScienceCloud will use it instead of automatically generating a entity id.
  • When updating existing records, it is only used for update of entity-level information, if Batch ID is undefined
It must be unique in the system.
Sample SCID The ScienceCloud ID for the attaching sample.
Assay SCID The ScienceCloud ID for the referenced assay.
Assay Group ID The assay group in which this assay is contained.
Assay Name First level of the biology dictionary describing your result (along with ASSAY_TYPE, determines the assay).
Assay Comment Extensive description of the Assay. Only required if you are entering data for a new assay for the first time.
Assay Short Name A short name used for the UI rather than the longer ASSAY_NAME and ASSAY_TYPE.
Assay Type Type of the Assay, such as PK, DMPK, IN VITRO, etc... Only required if there is an ambiguity on assay name (i.e. there is two different assays with the same name but different type in the project) or if you are entering data for a new assay for the first time.
Assay Parameter SCID The Assay Parameter ScienceCloud ID.
Assay Parameter Name Second level of the biology dictionary describing your result, usually referred to as Organism.
Assay Parameter Description Extensive description of the Assay Parameter. If left empty, "unknown" will be used.
Assay Parameter Short Name Short friendly name for the pair of ASSAY_PARAMETER_NAME and ASSAY_PARAMETER_DESCRIPTION.
Assay Result Type SCID The Assay Result Type ScienceCloud ID.
Assay Result Type Name Third level of the biology dictionary describing your result, e.g. IC50.
Assay Result Type Short Name Short friendly name for the Assay Result Type.
Test Set SCID Internal use only for now.
Operator Either one of the standard numeric comparison operator (=,>,<,<=,>=) or a custom onedefined in biology dictionary.
Value Actual value of the test. Can be either numeric or free text.
Run ID The run ID from the ScienceCloud Assay application.
Text Value The assay result if it is text rather than a number.
Unit Name of the unit used for this test, as defined in Biology Dictionary of the Project.
Test Unit SCID The test unit ScienceCloud ID.
Dose Value Numeric value of the Dose used for this test, if any.
Dose Unit Unit of the Dose used for this test, as defined in Biology Dictionary of the Project.
Dose Unit SCID The dose unit ScienceCloud ID.
Timepoint Value Numeric value of the Timepoint used for this test, if any.
Timepoint Unit Unit of the Timepoint used for this test, as defined in Biology Dictionary of the Project.
Timepoint Unit SCID The timepoint unit ScienceCloud ID.
Screener The username of the biologist to assign the assay to. This is the same username used to login into ScienceCloud. If undefined, default value is set to the username used during upload.
Screener Company The organization string the Screener works for.
Test Comment Free text providing additional description of this occurence of the test.
Trial ID Optional text to capture SOP, trial ID or experiment number.
Assay Result Registration Date A user-provided date an assay was registered to the system.
Assay Result Insert Date A system-generated date for when an assay was inserted or updated in the system.
Attachment File Path Path of the file (image, report, or other) that will be attached to this sample. Any file is valid for upload.
Sample Container ID Identifier of the container storing the sample (e.g. vial number, plate number).
Sample Well Well position in a plate.
Group ID A user-assigned group for this assay result.
Notification SCID The Notification ScienceCloud identifier, if a notification was generated for this assay result.
Change Type The type of change previously made to this assay, if applicable.
Custom Properties User-defined custom properties
Change Time The date-time this assay was updated, if applicable.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Assay-Result.
Connection Name The name of the connection opened by ScienceCloud Connection.

To obtain Assay Result data records for experimentation, use the Assay Result Query component.

To visualize the properties in a Assay Result data record, use the Assay Result to Generic Data component and drop the results into a viewer.

You can include Assay Result information in a report using the Assay Result View component and pass the results into a Report Viewer.

Assay Result Type Data Type

An Assay Result Type data record references a result type such as "IC50" or "Score". An Assay Result Type will be contained in one or more Assays.

Assay Result Type Property Description
Assay Result Type SCID The ScienceCloud ID of the Assay Result Type.
Assay Result Type Name The name of the assay result type, e.g. "IC50".
Assay Result Type Short Name The short name of the assay result type (in case the name is long).
Assay Result Type Multiple Value Function The operation to perform to combine multiple values for SAR, e.g. "min".
Assay SCID If this Assay Result Type was obtained from an assay (typically via Assay to Assay Result Types) then this is the ScienceCloud ID of the source Assay.
Unit SCID If this Assay Result Type was obtained from an assay (typically via Assay to Assay Result Types) then this an array of Units associated with the Assay Result Type in that assay.
Unit ID If this Assay Result Type was obtained from an assay (typically via Assay to Assay Result Types) then this an array of Unit IDs (names) associated with the Assay Result Type in that assay.
User Defined Properties A group of user-defined properties.
Team The name of the associated team.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Assay-Result-Type.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To obtain Assay Result Type data records, use the Assay Result Type Query component.

Assay Parameter Data Type

An Assay Parameter data record is contained by an assay and used to refer to an object such as the organism the assay was tested against. An Assay Parameter is contained in one or more Assays.

Assay Result Type Property Description
Assay Parameter SCID The ScienceCloud ID of the Assay Parameter.
Assay Parameter Name The name of the assay parameter, e.g. "Mouse". The combination of name and description is unique among parameters.
Assay Parameter Short Name A unique short name to refer to this name/description pair, e.g. "MousBl ip".
Assay Parameter Description Further description of the parameter, e.g. "Blood - IP". The combination of name and description is unique among parameters.
Assay Parameter Target Information about the target.
Assay Parameter Biomaterial Information about the biomaterial.
Assay Parameter Other Any other useful information.
Assay Parameter Species Further species information.
User Defined Properties A group of user-defined properties.
Team The name of the associated team.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Assay-Parameter.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To obtain Assay Parameter data records, use the Assay Parameter Query component.

Assay Group Data Type

An Assay Group data record references a group of assays in Project Data. An Assay Group will contain one or more Assays.

Assay Group Property Description
Assay Group SCID The ScienceCloud ID of the Assay Group.
Assay Group ID The name of this assay group.
Assay Group Description A longer description of the assays in this group.
Project IDs One or more project IDs that use this assay group.
Assay SCIDs One or more assay SCIDs that are in this assay group.
Team The name of the associated team.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Assay-Group.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To obtain Assay Group data records, use the Assay Group Query component.

Operator Data Type

An Operator data record references a comparison operator for assay result values. A Operator may be used by one or more Assays.

Operator Property Description
Operator SCID The ScienceCloud ID of the Operator.
Operator ID The ID of the operator, e.g. "=" or ">".
Team The name of the associated team.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Operator.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To obtain Operator data records, use the Operator Query component.

Unit Data Type

An Unit data record references an assay unit. A Unit may be used by one or more Assays.

Unit Property Description
Unit SCID The ScienceCloud ID of the Unit.
Unit ID The name of the Unit, e.g. "mg/kg".
Team The name of the associated team.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Unit.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To obtain Unit data records, use the Unit Query component.

Hit List Data Type

A Hit List data record represents a set of Batches that can be manipulated by combining Boolean rules, such as AND, OR, and ANDNOT.

Hit List Property Description
Hit List Name The name for the hit list.
Hit List SCID The ScienceCloud ID for the hit list.
Hit List Comment A comment on this list.
Entity Count The number of different entities in the batches in the hit list.
Batch Count The number of batches in the hit list.
Owner The username of the owner.
Team The Team of the owner.
Creation Date The date the hit list was created
REST API ID The object identifier used in the REST APIs.
Type The object type name: Hit-List.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To obtain Hit list data records for experimentation, use the Hitlist Query component.

To visualize the properties in a Hit List data record, use the Hitlist to Generic Data component and drop the results into a viewer.

You can include Hit List information in a report using the Hit List View component and pass the results into a Report Viewer.

Monomer Data Type

Monomer data record references a monomer definition for HELM usage in Project Data. The Monomer data record is also a molecule.

Monomer Property Description
Monomer SCID The ScienceCloud ID of the Monomer.
Monomer ID The unique ID of the Monomer.
Monomer Name The unique name of the Monomer.
Monomer Type The type of the Monomer.
Polymer Type The polymer type of the Monomer.
Natural Analog The name of the natural analog, if any.
Comments User comments.
Team The name of the associated team.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Monomer.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To obtain Monomer data records, use the Monomer Query component.

Salt Data Type

Salt data record references a salt definition for batches in Project Data. The Salt data record is also a molecule. A Salt may be used in one or more Batches.

Salt Property Description
Salt SCID The ScienceCloud ID of the Salt.
Salt ID The unique name of the salt.
Smiles The Smiles string of the salt.
Molecular Formula The molecular formula of the salt.
Molecular Weight The molecular weight of the salt.
Team The name of the associated team.
REST API ID The object identifier used in the REST APIs.
Type The object type name: Salt.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To obtain Salt data records, use the Salt Query component.

User Data Type

User data record references a ScienceCloud user.

User Property Description
User SCID The ScienceCloud ID of the User.
Organization The organization of the user.
User Name The ScienceCloud username associated with this user.
First Name The first name of the ScienceCloud user.
Last Name The last name of the ScienceCloud user.
E-Mail The email address of the user.
Team The name of the associated team (for current user).
Role An array of roles this user has (for current user).
Current Team The name of the user's current team (for current user).
REST API ID The object identifier used in the REST APIs.
Type The object type name: User.
Connection Name The name of the connection opened by ScienceCloud Connection component.

To obtain User data records, use the User Query component.

Related

Project Data Collection Components

Project Data Collection Protocols


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